Bioconductor Missing Data

Showing : Missing Data • reset

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3.0k

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Missing Data TCGAbiolinks Kaplan-Meier LIHC Xenabrowser

6.2 years ago jam526 • 0

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3.7k

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deseq2 sample_table missing data

updated 7.0 years ago by g.wang2 • 0 • written 10.9 years ago by anpham ▴ 70

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deseq2 paired samples missing data multiple treatments

updated 7.2 years ago by Michael Love 43k • written 7.2 years ago by greg.deakin • 0

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3.5k

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limma missing data methylation normalization

updated 8.3 years ago by Aaron Lun ★ 29k • written 8.3 years ago by mheydarpour ▴ 10

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3.1k

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limma contrast missing data lmfit makecontrasts

updated 8.4 years ago by Gordon Smyth 53k • written 8.5 years ago by wewolski ▴ 10

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1.2k

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pcamethods missing data

8.8 years ago eli-sava • 0

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9.4k

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software error rnaseq wgcna missing data

10.2 years ago • updated 9.8 years ago dvillarlozano ▴ 10

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1.3k

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cellhts2 upload missing data

updated 10.0 years ago by Joseph Barry ▴ 160 • written 10.0 years ago by zmorehouse • 0

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1.3k

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missing data filter

updated 10.2 years ago by James W. MacDonald 68k • written 10.2 years ago by rgescudero • 0

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1.9k

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missing data missing value imputation impute MICE bioconductor

10.3 years ago svlachavas ▴ 840

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1.8k

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software error missing data workflowinstall

10.7 years ago anoll2 • 0

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bayseq missing data

10.8 years ago k.w.lau • 0

12 results • Page 1 of 1

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Comment: Postdoctoral Fellow (Computational Biology / Bioinformatics) - Neuroepigenetics by mudasarnaeem2020 • 0

Promoting UDISE+ Features on Social Media to Increase Awareness https://udisseplus.com/[enter link description here][1] [1]: https://ud…

Comment: DiffBind plot.profile error by a2sahaaaq2c • 0

To resolve technical errors like installation failures or login issues, first ensure your device allows in the security settings and that…

Comment: soGGi error by shepherl 4.3k

We have tried to contact the soGGi maintainer to have them update the package to the newer version of gglot2 but they have so far been unre…

Comment: using limma trend workflow in CAMERA by Gordon Smyth 53k

No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.

Comment: Questions about bacon QC and correction on EWAS results by Tikaaa2sahaaaq2c • 0

In the world of mobile games, the 88ef game download has gained traction for its performance driven design [free download][1], similar to …

Votes

Answer: DiffBind differential analysis

Answer: Limma-voom sample weights and impact on DEG numbers

C: Why limma, edgeR, and DESeq did not implement fold change moderation first?

Comment: using limma trend workflow in CAMERA

C: z-score with DESeq2?

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Popular Question to Guido Hooiveld ★ 4.1k